Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm14173-201ENSMUST00000117690 278 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm15167-201ENSMUST00000121997 187 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm24810-201ENSMUST00000175317 70 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm20656-201ENSMUST00000176925 518 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm21978-201ENSMUST00000179696 377 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm26988-201ENSMUST00000183296 945 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm27402-201ENSMUST00000183890 120 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm37603-201ENSMUST00000192368 219 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm37243-201ENSMUST00000193407 595 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm4332-201ENSMUST00000196114 346 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm43115-201ENSMUST00000196244 160 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm43516-201ENSMUST00000196891 322 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm42437-201ENSMUST00000197263 923 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 AC171206.1-201ENSMUST00000213612 213 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm10540-201ENSMUST00000097581 276 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim47Q8C0E3 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm25117-201ENSMUST00000157194 144 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm22518-201ENSMUST00000158267 68 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm15974-201ENSMUST00000159103 531 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm20620-201ENSMUST00000177528 168 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm26556-201ENSMUST00000180645 320 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm26746-201ENSMUST00000181722 487 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm4832-201ENSMUST00000182679 399 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm37103-201ENSMUST00000191830 115 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm37164-201ENSMUST00000192809 637 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim47Q8C0E3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms