Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3b6P59708 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.49□□□□□ -1.53
Sf3b6P59708 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3b6P59708 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sf3b6P59708 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.49□□□□□ -1.53
Sf3b6P59708 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3b6P59708 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3b6P59708 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sf3b6P59708 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sf3b6P59708 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.49□□□□□ -1.53
Sf3b6P59708 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.49□□□□□ -1.53
Sf3b6P59708 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm23691-201ENSMUST00000101878 107 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm22103-201ENSMUST00000116733 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm26475-201ENSMUST00000116769 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm23620-201ENSMUST00000116812 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25042-201ENSMUST00000116856 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25540-201ENSMUST00000116880 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm12573-201ENSMUST00000118158 286 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm13785-201ENSMUST00000119099 690 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm5287-201ENSMUST00000120666 598 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm11606-201ENSMUST00000120706 617 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm15349-201ENSMUST00000121154 204 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm12399-201ENSMUST00000121475 446 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm12175-201ENSMUST00000122081 345 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm11254-201ENSMUST00000122368 653 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25434-201ENSMUST00000158278 167 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.48□□□□□ -1.53
Sf3b6P59708 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm20454-201ENSMUST00000172713 221 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm23550-201ENSMUST00000179003 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25123-201ENSMUST00000179154 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25353-201ENSMUST00000179366 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm22992-201ENSMUST00000179496 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm25892-201ENSMUST00000179867 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm24092-201ENSMUST00000180257 121 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.48□□□□□ -1.53
Sf3b6P59708 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm18447-201ENSMUST00000187501 307 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm37889-201ENSMUST00000194174 251 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm9227-201ENSMUST00000194733 566 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm43516-201ENSMUST00000196891 322 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm43243-201ENSMUST00000199964 278 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.48□□□□□ -1.53
Sf3b6P59708 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.48□□□□□ -1.53
Sf3b6P59708 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sf3b6P59708 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sf3b6P59708 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms