Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm42606-201ENSMUST00000114209 239 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Gm15779-201ENSMUST00000117470 412 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Gm14909-201ENSMUST00000117853 351 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Gm17377-201ENSMUST00000165184 207 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.9□□□□□ -1.3
Col18a1P39061 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col18a1P39061 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col18a1P39061 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col18a1P39061 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.9□□□□□ -1.3
Col18a1P39061 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col18a1P39061 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col18a1P39061 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col18a1P39061 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.9□□□□□ -1.31
Col18a1P39061 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.9□□□□□ -1.31
Col18a1P39061 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Gm38146-201ENSMUST00000194121 1293 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC6.9□□□□□ -1.31
Col18a1P39061 Gm43390-201ENSMUST00000196614 421 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Gnrh1-202ENSMUST00000223929 428 ntBASIC6.9□□□□□ -1.31
Col18a1P39061 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col18a1P39061 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col18a1P39061 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm23014-201ENSMUST00000104144 130 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm12577-201ENSMUST00000119701 574 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm27883-201ENSMUST00000183941 102 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm29073-201ENSMUST00000185563 664 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm29165-201ENSMUST00000190655 664 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm29211-201ENSMUST00000191470 664 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm25799-201ENSMUST00000082643 107 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm23378-201ENSMUST00000082942 107 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Col18a1P39061 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.89□□□□□ -1.31
Col18a1P39061 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col18a1P39061 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.89□□□□□ -1.31
Col18a1P39061 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col18a1P39061 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col18a1P39061 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col18a1P39061 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col18a1P39061 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col18a1P39061 Gm13607-201ENSMUST00000117875 539 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC6.88□□□□□ -1.31
Col18a1P39061 Gm6632-201ENSMUST00000168425 954 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm3084-201ENSMUST00000169967 598 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm28957-201ENSMUST00000190174 373 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm29072-201ENSMUST00000191149 678 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm44650-201ENSMUST00000206929 194 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Gm2544-201ENSMUST00000222702 756 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 AC133176.1-201ENSMUST00000226668 219 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Gm25260-201ENSMUST00000083053 134 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col18a1P39061 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.88□□□□□ -1.31
Col18a1P39061 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col18a1P39061 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.88□□□□□ -1.31
Col18a1P39061 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms