Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm5155-201ENSMUST00000072381 2841 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm8675-201ENSMUST00000201408 1856 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm23133-201ENSMUST00000104255 135 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm14521-201ENSMUST00000119545 350 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm23669-201ENSMUST00000157470 128 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm24741-201ENSMUST00000158857 106 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm16101-201ENSMUST00000160695 430 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm19203-201ENSMUST00000174049 939 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm27409-201ENSMUST00000184727 80 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm28967-201ENSMUST00000187351 281 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm44923-201ENSMUST00000206673 85 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm18601-201ENSMUST00000220831 634 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm28392-201ENSMUST00000077630 393 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Mir143-201ENSMUST00000083511 63 ntBASIC6.6□□□□□ -1.35
Clp1Q99LI9 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Clp1Q99LI9 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Clp1Q99LI9 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm14750-201ENSMUST00000118262 516 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm11781-201ENSMUST00000118328 472 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm12482-201ENSMUST00000120435 630 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm14530-201ENSMUST00000122391 333 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm24289-201ENSMUST00000157629 135 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm20519-201ENSMUST00000173684 359 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm24303-201ENSMUST00000178237 126 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm28467-201ENSMUST00000190981 318 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm29389-201ENSMUST00000191562 352 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm17934-201ENSMUST00000192818 422 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm37399-201ENSMUST00000195224 416 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm42924-201ENSMUST00000197261 185 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm9480-201ENSMUST00000198038 616 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.59□□□□□ -1.35
Clp1Q99LI9 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Clp1Q99LI9 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Clp1Q99LI9 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Clp1Q99LI9 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.59□□□□□ -1.36
Clp1Q99LI9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms