Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28978-201ENSMUST00000191120 615 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm37172-201ENSMUST00000191926 615 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm9332-201ENSMUST00000198431 730 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm43841-201ENSMUST00000199491 586 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm43973-201ENSMUST00000203562 210 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Gm45249-201ENSMUST00000211021 348 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.12□□□□□ -1.75
Cdx1P18111 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx1P18111 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.12□□□□□ -1.75
Cdx1P18111 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Cdx1P18111 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx1P18111 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.12□□□□□ -1.75
Cdx1P18111 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx1P18111 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx1P18111 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm25758-201ENSMUST00000103987 129 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm12704-201ENSMUST00000119789 464 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm16200-201ENSMUST00000120385 331 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm11448-201ENSMUST00000120427 450 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm11350-201ENSMUST00000121436 870 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm12267-201ENSMUST00000121609 761 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm24692-201ENSMUST00000157761 146 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm24175-201ENSMUST00000158931 129 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm17153-201ENSMUST00000171314 490 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 Mir3062-201ENSMUST00000174986 105 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm23806-201ENSMUST00000175157 109 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Cdx1P18111 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Cdx1P18111 Mir6539-201ENSMUST00000183732 110 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm29596-201ENSMUST00000185710 385 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm31306-201ENSMUST00000197517 508 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm18325-201ENSMUST00000203228 835 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm18007-201ENSMUST00000205019 844 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm6171-201ENSMUST00000220760 645 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.11□□□□□ -1.75
Cdx1P18111 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Cdx1P18111 Clec2j-201ENSMUST00000032517 515 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm26072-201ENSMUST00000083135 107 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Mir134-201ENSMUST00000083492 71 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx1P18111 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Cdx1P18111 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Cdx1P18111 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.11□□□□□ -1.75
Cdx1P18111 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx1P18111 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.11□□□□□ -1.75
Cdx1P18111 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms