Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
H2afb1S4R1E0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16■□□□□ 0.15
H2afb1S4R1E0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16■□□□□ 0.15
H2afb1S4R1E0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Gm5874-201ENSMUST00000096101 508 ntBASIC16■□□□□ 0.15
H2afb1S4R1E0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb1S4R1E0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
H2afb1S4R1E0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb1S4R1E0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
H2afb1S4R1E0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 AV356131-201ENSMUST00000206201 750 ntBASIC15.96■□□□□ 0.15
H2afb1S4R1E0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb1S4R1E0 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.96■□□□□ 0.14
H2afb1S4R1E0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb1S4R1E0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb1S4R1E0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb1S4R1E0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb1S4R1E0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb1S4R1E0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms