Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
CcsQ9WU84 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.71□□□□□ -0.21
CcsQ9WU84 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CcsQ9WU84 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CcsQ9WU84 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CcsQ9WU84 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CcsQ9WU84 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.7□□□□□ -0.22
CcsQ9WU84 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.7□□□□□ -0.22
CcsQ9WU84 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.7□□□□□ -0.22
CcsQ9WU84 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.7□□□□□ -0.22
CcsQ9WU84 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CcsQ9WU84 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CcsQ9WU84 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Gm27801-201ENSMUST00000184174 223 ntBASIC13.69□□□□□ -0.22
CcsQ9WU84 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CcsQ9WU84 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CcsQ9WU84 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.68□□□□□ -0.22
CcsQ9WU84 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CcsQ9WU84 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CcsQ9WU84 Haglr-201ENSMUST00000100000 2085 ntBASIC13.68□□□□□ -0.22
CcsQ9WU84 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CcsQ9WU84 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CcsQ9WU84 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms