Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col13a1Q9R1N9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Gm22697-201ENSMUST00000175194 63 ntBASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col13a1Q9R1N9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col13a1Q9R1N9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col13a1Q9R1N9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Gm12085-201ENSMUST00000119263 940 ntBASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col13a1Q9R1N9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col13a1Q9R1N9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gm25016-201ENSMUST00000158399 131 ntBASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gm27463-201ENSMUST00000183569 57 ntBASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gm28033-201ENSMUST00000184224 96 ntBASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col13a1Q9R1N9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms