Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd2Q9R1A8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd2Q9R1A8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfwd2Q9R1A8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 AV356131-201ENSMUST00000206201 750 ntBASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.15■□□□□ 0.5
Rfwd2Q9R1A8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rfwd2Q9R1A8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Gm26571-201ENSMUST00000181399 666 ntBASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfwd2Q9R1A8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms