Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpf2Q9JJ80 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Gm38285-201ENSMUST00000192928 922 ntBASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpf2Q9JJ80 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Rpf2Q9JJ80 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpf2Q9JJ80 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Rpf2Q9JJ80 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Gm29791-202ENSMUST00000207888 369 ntBASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpf2Q9JJ80 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpf2Q9JJ80 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rpf2Q9JJ80 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpf2Q9JJ80 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpf2Q9JJ80 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms