Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ClpxQ9JHS4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ClpxQ9JHS4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ClpxQ9JHS4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClpxQ9JHS4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClpxQ9JHS4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms