Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps35Q9EQH3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Vps35Q9EQH3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps35Q9EQH3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Gm22240-201ENSMUST00000175225 82 ntBASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps35Q9EQH3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.6■□□□□ 0.41
Vps35Q9EQH3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.6■□□□□ 0.41
Vps35Q9EQH3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps35Q9EQH3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps35Q9EQH3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Vps35Q9EQH3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.58■□□□□ 0.41
Vps35Q9EQH3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps35Q9EQH3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps35Q9EQH3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps35Q9EQH3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms