Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne8Q9DC53 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Gm8969-201ENSMUST00000199694 526 ntBASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Gm29791-202ENSMUST00000207888 369 ntBASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne8Q9DC53 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Gm12896-201ENSMUST00000118430 226 ntBASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Dio3-201ENSMUST00000097228 1449 ntBASIC18.4■□□□□ 0.54
Cpne8Q9DC53 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cpne8Q9DC53 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne8Q9DC53 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Gm11249-201ENSMUST00000117071 859 ntBASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Gm27275-201ENSMUST00000184318 272 ntBASIC18.38■□□□□ 0.53
Cpne8Q9DC53 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Gm4968-201ENSMUST00000071458 858 ntBASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne8Q9DC53 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Mir8112-201ENSMUST00000184382 131 ntBASIC18.37■□□□□ 0.53
Cpne8Q9DC53 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Gm10602-201ENSMUST00000098239 609 ntBASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne8Q9DC53 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne8Q9DC53 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms