Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Gm24841-201ENSMUST00000158676 357 ntBASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138rt1Q9D9M9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138rt1Q9D9M9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138rt1Q9D9M9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138rt1Q9D9M9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm10252-201ENSMUST00000209541 832 ntBASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138rt1Q9D9M9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138rt1Q9D9M9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf138rt1Q9D9M9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Rnf138rt1Q9D9M9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Rnf138rt1Q9D9M9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Gm38027-201ENSMUST00000192315 235 ntBASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138rt1Q9D9M9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.5■□□□□ 0.55
Rnf138rt1Q9D9M9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms