Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndc80Q9D0F1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Gm12441-201ENSMUST00000121806 588 ntBASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ndc80Q9D0F1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndc80Q9D0F1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.91■□□□□ 0.46
Ndc80Q9D0F1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndc80Q9D0F1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Ndc80Q9D0F1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.89■□□□□ 0.46
Ndc80Q9D0F1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ndc80Q9D0F1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndc80Q9D0F1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms