Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xrcc3Q9CXE6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xrcc3Q9CXE6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Xrcc3Q9CXE6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xrcc3Q9CXE6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Gm21956-201ENSMUST00000179946 522 ntBASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Gm26833-201ENSMUST00000180899 440 ntBASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Xrcc3Q9CXE6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Xrcc3Q9CXE6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms