Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Idnk-204ENSMUST00000226010 1898 ntBASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rer1Q9CQU3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rer1Q9CQU3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rer1Q9CQU3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Gm8495-201ENSMUST00000188740 694 ntBASIC14.41□□□□□ -0.1
Rer1Q9CQU3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rer1Q9CQU3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rer1Q9CQU3 Gm2399-201ENSMUST00000104944 225 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms