Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Gm22325-201ENSMUST00000158904 308 ntBASIC17.29■□□□□ 0.36
Trim8Q99PJ2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.29■□□□□ 0.36
Trim8Q99PJ2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.29■□□□□ 0.36
Trim8Q99PJ2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim8Q99PJ2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim8Q99PJ2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim8Q99PJ2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim8Q99PJ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Gm42778-201ENSMUST00000199644 553 ntBASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Gm42642-201ENSMUST00000200683 355 ntBASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim8Q99PJ2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim8Q99PJ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms