Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh15Q99PJ1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh15Q99PJ1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm12895-201ENSMUST00000122214 226 ntBASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm11452-201ENSMUST00000122376 690 ntBASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm2651-201ENSMUST00000203560 838 ntBASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm18206-201ENSMUST00000207027 926 ntBASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh15Q99PJ1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdh15Q99PJ1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh15Q99PJ1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh15Q99PJ1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh15Q99PJ1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Gm37935-201ENSMUST00000192012 982 ntBASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh15Q99PJ1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh15Q99PJ1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms