Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Gm11355-201ENSMUST00000121120 306 ntBASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.05■□□□□ 0.48
Cdh23Q99PF4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.05■□□□□ 0.48
Cdh23Q99PF4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.04■□□□□ 0.48
Cdh23Q99PF4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh23Q99PF4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.03■□□□□ 0.48
Cdh23Q99PF4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Gm11452-201ENSMUST00000122376 690 ntBASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh23Q99PF4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.03■□□□□ 0.48
Cdh23Q99PF4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Gm45328-201ENSMUST00000210942 917 ntBASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cdh23Q99PF4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh23Q99PF4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Rps4l-201ENSMUST00000071745 943 ntBASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdh23Q99PF4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18■□□□□ 0.47
Cdh23Q99PF4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cdh23Q99PF4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18■□□□□ 0.47
Cdh23Q99PF4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18■□□□□ 0.47
Cdh23Q99PF4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh23Q99PF4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh23Q99PF4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms