Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.82■□□□□ 0.12
Raf1Q99N57 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Raf1Q99N57 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.82■□□□□ 0.12
Raf1Q99N57 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.82■□□□□ 0.12
Raf1Q99N57 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Raf1Q99N57 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Raf1Q99N57 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Raf1Q99N57 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.81■□□□□ 0.12
Raf1Q99N57 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Raf1Q99N57 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Raf1Q99N57 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.8■□□□□ 0.12
Raf1Q99N57 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.8■□□□□ 0.12
Raf1Q99N57 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.8■□□□□ 0.12
Raf1Q99N57 Gm5408-201ENSMUST00000197998 747 ntBASIC15.8■□□□□ 0.12
Raf1Q99N57 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.8■□□□□ 0.12
Raf1Q99N57 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Raf1Q99N57 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Raf1Q99N57 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Raf1Q99N57 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Raf1Q99N57 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.79■□□□□ 0.12
Raf1Q99N57 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Raf1Q99N57 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Raf1Q99N57 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.78■□□□□ 0.12
Raf1Q99N57 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Raf1Q99N57 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Raf1Q99N57 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Raf1Q99N57 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.78■□□□□ 0.12
Raf1Q99N57 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms