Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpgs1Q99MS8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Timm23-208ENSMUST00000226683 750 ntBASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpgs1Q99MS8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpgs1Q99MS8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpgs1Q99MS8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpgs1Q99MS8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpgs1Q99MS8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpgs1Q99MS8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tpgs1Q99MS8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpgs1Q99MS8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms