Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf111Q99ML9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf111Q99ML9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf111Q99ML9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf111Q99ML9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf111Q99ML9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf111Q99ML9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf111Q99ML9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf111Q99ML9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rnf111Q99ML9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms