Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd2Q99JR8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd2Q99JR8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd2Q99JR8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd2Q99JR8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Smarcd2Q99JR8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd2Q99JR8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd2Q99JR8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Smarcd2Q99JR8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcd2Q99JR8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcd2Q99JR8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms