Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rfc4Q99J62 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.33■□□□□ 0.85
Rfc4Q99J62 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Gm7791-201ENSMUST00000219066 539 ntBASIC20.33■□□□□ 0.85
Rfc4Q99J62 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.33■□□□□ 0.85
Rfc4Q99J62 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc4Q99J62 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.33■□□□□ 0.84
Rfc4Q99J62 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.33■□□□□ 0.84
Rfc4Q99J62 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfc4Q99J62 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfc4Q99J62 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfc4Q99J62 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfc4Q99J62 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.32■□□□□ 0.84
Rfc4Q99J62 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Gm27389-201ENSMUST00000183622 195 ntBASIC20.32■□□□□ 0.84
Rfc4Q99J62 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc4Q99J62 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Rfc4Q99J62 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rfc4Q99J62 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.31■□□□□ 0.84
Rfc4Q99J62 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm10418-201ENSMUST00000100943 576 ntBASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm24841-201ENSMUST00000158676 357 ntBASIC20.3■□□□□ 0.84
Rfc4Q99J62 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm21559-201ENSMUST00000220638 855 ntBASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm8587-201ENSMUST00000076538 843 ntBASIC20.3■□□□□ 0.84
Rfc4Q99J62 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
Rfc4Q99J62 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rfc4Q99J62 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.29■□□□□ 0.84
Rfc4Q99J62 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Gm27704-201ENSMUST00000185094 107 ntBASIC20.28■□□□□ 0.84
Rfc4Q99J62 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfc4Q99J62 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfc4Q99J62 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfc4Q99J62 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms