Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prdm9Q96EQ9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Gm38027-201ENSMUST00000192315 235 ntBASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prdm9Q96EQ9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Prdm9Q96EQ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prdm9Q96EQ9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prdm9Q96EQ9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prdm9Q96EQ9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms