Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Chmp1aQ921W0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Gm21956-201ENSMUST00000179946 522 ntBASIC15.6■□□□□ 0.09
Chmp1aQ921W0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chmp1aQ921W0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chmp1aQ921W0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chmp1aQ921W0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.58■□□□□ 0.08
Chmp1aQ921W0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Chmp1aQ921W0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp1aQ921W0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp1aQ921W0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms