Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Gm29791-202ENSMUST00000207888 369 ntBASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhac2Q91Y09 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhac2Q91Y09 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Gm14859-201ENSMUST00000117752 357 ntBASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Gm21559-201ENSMUST00000220638 855 ntBASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Gm8587-201ENSMUST00000076538 843 ntBASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhac2Q91Y09 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Grk6-206ENSMUST00000224995 2971 ntBASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhac2Q91Y09 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhac2Q91Y09 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhac2Q91Y09 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Gm10566-201ENSMUST00000086739 996 ntBASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhac2Q91Y09 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhac2Q91Y09 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms