Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb1Q91Y08 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Mir8112-201ENSMUST00000184382 131 ntBASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb1Q91Y08 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Gm27011-201ENSMUST00000182352 972 ntBASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb1Q91Y08 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb1Q91Y08 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.33■□□□□ 0.53
Pcdhb1Q91Y08 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.33■□□□□ 0.53
Pcdhb1Q91Y08 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb1Q91Y08 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdhb1Q91Y08 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Gm13401-201ENSMUST00000117074 291 ntBASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Gm12527-201ENSMUST00000117967 564 ntBASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhb1Q91Y08 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb1Q91Y08 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb1Q91Y08 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms