Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb3Q91XZ7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb3Q91XZ7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb3Q91XZ7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb3Q91XZ7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb3Q91XZ7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb3Q91XZ7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb3Q91XZ7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb3Q91XZ7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb3Q91XZ7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms