Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhb4Q91XZ6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb4Q91XZ6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Gm15039-201ENSMUST00000118914 875 ntBASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb4Q91XZ6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Gm13148-201ENSMUST00000118892 745 ntBASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb4Q91XZ6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Mir5133-201ENSMUST00000174955 77 ntBASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb4Q91XZ6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb4Q91XZ6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms