Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb8Q91XZ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb8Q91XZ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb8Q91XZ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb8Q91XZ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.21■□□□□ 0.34
Pcdhb8Q91XZ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Gm4968-201ENSMUST00000071458 858 ntBASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb8Q91XZ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb8Q91XZ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb8Q91XZ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms