Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gm27011-201ENSMUST00000182352 972 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gm38285-201ENSMUST00000192928 922 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga11Q91XY8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.02■□□□□ 0.31
Pcdhga11Q91XY8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga11Q91XY8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga11Q91XY8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhga11Q91XY8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga11Q91XY8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga11Q91XY8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga11Q91XY8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga11Q91XY8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Gm26524-201ENSMUST00000192339 390 ntBASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Rab3c-203ENSMUST00000224180 967 ntBASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Zfp783-201ENSMUST00000095946 670 ntBASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Flg-201ENSMUST00000050758 1488 ntBASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga11Q91XY8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Pcdhga11Q91XY8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms