Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc5Q91XW9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.1■□□□□ 0.81
Pcdhgc5Q91XW9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc5Q91XW9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Timm23-208ENSMUST00000226683 750 ntBASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc5Q91XW9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.08■□□□□ 0.81
Pcdhgc5Q91XW9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgc5Q91XW9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhgc5Q91XW9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Pcdhgc5Q91XW9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgc5Q91XW9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc5Q91XW9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Gm12382-201ENSMUST00000122005 922 ntBASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc5Q91XW9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhgc5Q91XW9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgc5Q91XW9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgc5Q91XW9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms