Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.43■□□□□ 0.38
Vsx1Q91V10 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vsx1Q91V10 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Gm17807-201ENSMUST00000186869 298 ntBASIC17.42■□□□□ 0.38
Vsx1Q91V10 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.42■□□□□ 0.38
Vsx1Q91V10 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Mir2861-201ENSMUST00000175539 82 ntBASIC17.41■□□□□ 0.38
Vsx1Q91V10 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Vsx1Q91V10 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.4■□□□□ 0.38
Vsx1Q91V10 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Gm7153-201ENSMUST00000117092 455 ntBASIC17.4■□□□□ 0.38
Vsx1Q91V10 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.4■□□□□ 0.38
Vsx1Q91V10 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vsx1Q91V10 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.39■□□□□ 0.37
Vsx1Q91V10 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vsx1Q91V10 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.39■□□□□ 0.37
Vsx1Q91V10 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.39■□□□□ 0.37
Vsx1Q91V10 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vsx1Q91V10 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vsx1Q91V10 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vsx1Q91V10 Gm25925-201ENSMUST00000158314 306 ntBASIC17.38■□□□□ 0.37
Vsx1Q91V10 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.38■□□□□ 0.37
Vsx1Q91V10 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.38■□□□□ 0.37
Vsx1Q91V10 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vsx1Q91V10 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms