Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
H1fooQ8VIK3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Zfp783-201ENSMUST00000095946 670 ntBASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H1fooQ8VIK3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Idnk-204ENSMUST00000226010 1898 ntBASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H1fooQ8VIK3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H1fooQ8VIK3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Gm8969-201ENSMUST00000199694 526 ntBASIC14.74□□□□□ -0.05
H1fooQ8VIK3 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Gm10602-201ENSMUST00000098239 609 ntBASIC14.74□□□□□ -0.05
H1fooQ8VIK3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms