Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pcdh18Q8VHR0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh18Q8VHR0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh18Q8VHR0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Pcdh18Q8VHR0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.02■□□□□ 0.31
Pcdh18Q8VHR0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh18Q8VHR0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh18Q8VHR0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh18Q8VHR0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Gm13146-201ENSMUST00000118508 780 ntBASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Gm42778-201ENSMUST00000199644 553 ntBASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh18Q8VHR0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms