Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rprd1aQ8VDS4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rprd1aQ8VDS4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rprd1aQ8VDS4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Gm10418-201ENSMUST00000100943 576 ntBASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rprd1aQ8VDS4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rprd1aQ8VDS4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Gm29791-202ENSMUST00000207888 369 ntBASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Gm10252-201ENSMUST00000209541 832 ntBASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rprd1aQ8VDS4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Gm715-201ENSMUST00000117865 831 ntBASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rprd1aQ8VDS4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms