Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Gm5417-201ENSMUST00000079706 384 ntBASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndc1Q8VCB1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gm13836-201ENSMUST00000121159 501 ntBASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ndc1Q8VCB1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.63■□□□□ 0.25
Ndc1Q8VCB1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.62■□□□□ 0.25
Ndc1Q8VCB1 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc1Q8VCB1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms