Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slf1Q8R3P9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slf1Q8R3P9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slf1Q8R3P9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slf1Q8R3P9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slf1Q8R3P9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slf1Q8R3P9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms