Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col23a1Q8K4G2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Col23a1Q8K4G2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Col23a1Q8K4G2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Gm2651-201ENSMUST00000203560 838 ntBASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col23a1Q8K4G2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col23a1Q8K4G2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col23a1Q8K4G2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col23a1Q8K4G2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col23a1Q8K4G2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms