Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcll1Q8JZS7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmgcll1Q8JZS7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmgcll1Q8JZS7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcll1Q8JZS7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcll1Q8JZS7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Gm27463-201ENSMUST00000183569 57 ntBASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcll1Q8JZS7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hmgcll1Q8JZS7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.14■□□□□ 0.49
Hmgcll1Q8JZS7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcll1Q8JZS7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms