Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip4Q8CI96 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Clip4Q8CI96 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.76■□□□□ 0.43
Clip4Q8CI96 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.76■□□□□ 0.43
Clip4Q8CI96 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Gm37856-201ENSMUST00000191634 999 ntBASIC17.76■□□□□ 0.43
Clip4Q8CI96 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clip4Q8CI96 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.75■□□□□ 0.43
Clip4Q8CI96 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Gm12896-201ENSMUST00000118430 226 ntBASIC17.75■□□□□ 0.43
Clip4Q8CI96 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Clip4Q8CI96 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Gm2559-201ENSMUST00000201323 363 ntBASIC17.75■□□□□ 0.43
Clip4Q8CI96 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip4Q8CI96 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.75■□□□□ 0.43
Clip4Q8CI96 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.74■□□□□ 0.43
Clip4Q8CI96 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.74■□□□□ 0.43
Clip4Q8CI96 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip4Q8CI96 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Clip4Q8CI96 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.73■□□□□ 0.43
Clip4Q8CI96 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clip4Q8CI96 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.72■□□□□ 0.43
Clip4Q8CI96 Trmt13-210ENSMUST00000198454 880 ntBASIC17.72■□□□□ 0.43
Clip4Q8CI96 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clip4Q8CI96 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clip4Q8CI96 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms