Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Gm5864-201ENSMUST00000202263 970 ntBASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rp1l1Q8CGM2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rp1l1Q8CGM2 Gm18733-201ENSMUST00000173950 856 ntBASIC18.39■□□□□ 0.54
Rp1l1Q8CGM2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rp1l1Q8CGM2 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.39■□□□□ 0.54
Rp1l1Q8CGM2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rp1l1Q8CGM2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rp1l1Q8CGM2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rp1l1Q8CGM2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Gm43347-201ENSMUST00000200226 580 ntBASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.37■□□□□ 0.53
Rp1l1Q8CGM2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rp1l1Q8CGM2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rp1l1Q8CGM2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1l1Q8CGM2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms