Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Gm11927-201ENSMUST00000118472 759 ntBASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc38Q8CDN8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc38Q8CDN8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc38Q8CDN8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Mir2861-201ENSMUST00000175539 82 ntBASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm29791-202ENSMUST00000207888 369 ntBASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.58■□□□□ 0.72
Ccdc38Q8CDN8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc38Q8CDN8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc38Q8CDN8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc38Q8CDN8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Gm10418-201ENSMUST00000100943 576 ntBASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms