Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp1Q8C8C1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 AW822252-206ENSMUST00000208904 237 ntBASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp1Q8C8C1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Gm27742-201ENSMUST00000184667 60 ntBASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Gm34391-201ENSMUST00000203706 907 ntBASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp1Q8C8C1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp1Q8C8C1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp1Q8C8C1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp1Q8C8C1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp1Q8C8C1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.13■□□□□ 0.81
Rtp1Q8C8C1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Gm24841-201ENSMUST00000158676 357 ntBASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Gm28659-201ENSMUST00000188013 759 ntBASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rtp1Q8C8C1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp1Q8C8C1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms