Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lin9Q8C735 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lin9Q8C735 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.3■□□□□ 0.68
Lin9Q8C735 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.3■□□□□ 0.68
Lin9Q8C735 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lin9Q8C735 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lin9Q8C735 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lin9Q8C735 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lin9Q8C735 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Lin9Q8C735 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lin9Q8C735 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lin9Q8C735 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lin9Q8C735 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lin9Q8C735 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lin9Q8C735 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.29■□□□□ 0.68
Lin9Q8C735 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lin9Q8C735 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lin9Q8C735 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lin9Q8C735 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lin9Q8C735 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Lin9Q8C735 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lin9Q8C735 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lin9Q8C735 Gm10698-201ENSMUST00000182663 604 ntBASIC19.27■□□□□ 0.68
Lin9Q8C735 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lin9Q8C735 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.27■□□□□ 0.68
Lin9Q8C735 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lin9Q8C735 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lin9Q8C735 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lin9Q8C735 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lin9Q8C735 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lin9Q8C735 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.26■□□□□ 0.67
Lin9Q8C735 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.26■□□□□ 0.67
Lin9Q8C735 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lin9Q8C735 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lin9Q8C735 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lin9Q8C735 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.25■□□□□ 0.67
Lin9Q8C735 Flg-201ENSMUST00000050758 1488 ntBASIC19.25■□□□□ 0.67
Lin9Q8C735 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Gm715-201ENSMUST00000117865 831 ntBASIC19.25■□□□□ 0.67
Lin9Q8C735 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.25■□□□□ 0.67
Lin9Q8C735 Gm38285-201ENSMUST00000192928 922 ntBASIC19.25■□□□□ 0.67
Lin9Q8C735 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.25■□□□□ 0.67
Lin9Q8C735 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Lin9Q8C735 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lin9Q8C735 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.24■□□□□ 0.67
Lin9Q8C735 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.24■□□□□ 0.67
Lin9Q8C735 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.24■□□□□ 0.67
Lin9Q8C735 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lin9Q8C735 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
Lin9Q8C735 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lin9Q8C735 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.23■□□□□ 0.67
Lin9Q8C735 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lin9Q8C735 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Lin9Q8C735 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms