Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.5■□□□□ 0.23
Cpne1Q8C166 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
Cpne1Q8C166 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Gm10138-203ENSMUST00000206952 366 ntBASIC16.49■□□□□ 0.23
Cpne1Q8C166 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne1Q8C166 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.48■□□□□ 0.23
Cpne1Q8C166 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Gm18666-201ENSMUST00000190039 958 ntBASIC16.48■□□□□ 0.23
Cpne1Q8C166 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.48■□□□□ 0.23
Cpne1Q8C166 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpne1Q8C166 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.47■□□□□ 0.23
Cpne1Q8C166 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Gm5643-201ENSMUST00000117081 966 ntBASIC16.47■□□□□ 0.23
Cpne1Q8C166 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Gm13168-201ENSMUST00000121771 632 ntBASIC16.47■□□□□ 0.23
Cpne1Q8C166 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Cpne1Q8C166 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne1Q8C166 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.46■□□□□ 0.23
Cpne1Q8C166 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Gm15375-201ENSMUST00000119510 849 ntBASIC16.46■□□□□ 0.23
Cpne1Q8C166 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne1Q8C166 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.46■□□□□ 0.23
Cpne1Q8C166 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Cpne1Q8C166 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cpne1Q8C166 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.45■□□□□ 0.22
Cpne1Q8C166 Mir2861-201ENSMUST00000175539 82 ntBASIC16.45■□□□□ 0.22
Cpne1Q8C166 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.45■□□□□ 0.22
Cpne1Q8C166 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cpne1Q8C166 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne1Q8C166 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms