Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trerf1Q8BXJ2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trerf1Q8BXJ2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trerf1Q8BXJ2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trerf1Q8BXJ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trerf1Q8BXJ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trerf1Q8BXJ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trerf1Q8BXJ2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trerf1Q8BXJ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trerf1Q8BXJ2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms