Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smg1Q8BKX6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smg1Q8BKX6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.96□□□□□ -0.02
Smg1Q8BKX6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Smg1Q8BKX6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Gm10566-201ENSMUST00000086739 996 ntBASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Mir1668-201ENSMUST00000184114 107 ntBASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smg1Q8BKX6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Gm7213-201ENSMUST00000215977 950 ntBASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smg1Q8BKX6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Gm43575-201ENSMUST00000196420 516 ntBASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.93□□□□□ -0.02
Smg1Q8BKX6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smg1Q8BKX6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smg1Q8BKX6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms